Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q6MJ10)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6MJ10
- Type
- protein
- Length
- 1,375 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x34a2a32567dD00A08b524564Bc44Da034F3a2cEe
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q6MJ10
- Pockets
- 15 · best druggability 0.78
Structure
1 distinct chain · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1375 | 38% helix, 20% strand | Q6MJ10 |
Pockets
15 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 657 | 0.78 | 0.84 | 57 | empty |
| 2 | 1181 | 0.76 | 0.79 | 104 | empty |
| 3 | 647 | 0.70 | 0.77 | 39 | empty |
| 4 | 697 | 0.70 | 0.77 | 68 | empty |
| 5 | 449 | 0.69 | 0.80 | 56 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6MJ10
- Elsewhere: UniProt Q6MJ10 · AlphaFold DB Q6MJ10
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