Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q9X6Y2)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9X6Y2
- Type
- protein
- Length
- 1,576 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q9X6Y2
- Pockets
- 20 · best druggability 0.79
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1576 | 39% helix, 21% strand | Q9X6Y2 |
Pockets
20 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1145 | 0.79 | 0.81 | 100 | empty |
| 2 | 936 | 0.75 | 0.78 | 72 | empty |
| 3 | 688 | 0.72 | 0.77 | 38 | empty |
| 4 | 605 | 0.71 | 0.79 | 77 | empty |
| 5 | 943 | 0.71 | 0.75 | 66 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9X6Y2
- Elsewhere: UniProt Q9X6Y2 · AlphaFold DB Q9X6Y2
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