Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A4SHV0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4SHV0
- Type
- protein
- Length
- 1,434 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb2A6F162eE2B0935Fd20DD0B286B955A427d0772
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A4SHV0
- Pockets
- 19 · best druggability 0.80
Structure
1 distinct chain · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1434 | 40% helix, 19% strand | A4SHV0 |
Pockets
19 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1034 | 0.80 | 0.82 | 82 | empty |
| 2 | 1017 | 0.73 | 0.77 | 81 | empty |
| 3 | 815 | 0.73 | 0.78 | 70 | empty |
| 4 | 620 | 0.70 | 0.77 | 38 | empty |
| 5 | 859 | 0.69 | 0.75 | 52 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4SHV0
- Elsewhere: UniProt A4SHV0 · AlphaFold DB A4SHV0
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