Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q32RY2)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q32RY2
- Type
- protein
- Length
- 1,250 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x52E3CDE9815A62B85857BFe668884c9Bb2099566
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- Q32RY2
- Pockets
- 20 · best druggability 0.75
Structure
1 distinct chain · 29% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1250 | 29% helix, 12% strand | Q32RY2 |
Pockets
20 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1175 | 0.75 | 0.77 | 94 | empty |
| 2 | 715 | 0.73 | 0.79 | 69 | empty |
| 3 | 605 | 0.68 | 0.77 | 61 | empty |
| 4 | 385 | 0.66 | 0.79 | 38 | empty |
| 5 | 206 | 0.63 | 0.83 | 29 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q32RY2
- Elsewhere: UniProt Q32RY2 · AlphaFold DB Q32RY2
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