Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q6L3A5)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6L3A5
- Type
- protein
- Length
- 1,534 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- Q6L3A5
- Pockets
- 20 · best druggability 0.77
Structure
1 distinct chain · 21% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1534 | 21% helix, 16% strand | Q6L3A5 |
Pockets
20 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1171 | 0.77 | 0.79 | 75 | empty |
| 2 | 1021 | 0.75 | 0.77 | 95 | empty |
| 3 | 475 | 0.70 | 0.80 | 45 | empty |
| 4 | 687 | 0.69 | 0.76 | 55 | empty |
| 5 | 555 | 0.63 | 0.75 | 47 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6L3A5
- Elsewhere: UniProt Q6L3A5 · AlphaFold DB Q6L3A5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.