Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (B0Z545)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0Z545
- Type
- protein
- Length
- 1,383 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd0F50FFcB725A32341066a3d047628d87754e5f8
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- B0Z545
- Pockets
- 18 · best druggability 0.81
Structure
1 distinct chain · 24% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1383 | 24% helix, 21% strand | B0Z545 |
Pockets
18 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 943 | 0.81 | 0.82 | 89 | empty |
| 2 | 557 | 0.70 | 0.79 | 58 | empty |
| 3 | 381 | 0.67 | 0.80 | 42 | empty |
| 4 | 487 | 0.62 | 0.76 | 53 | empty |
| 5 | 453 | 0.61 | 0.75 | 42 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0Z545
- Elsewhere: UniProt B0Z545 · AlphaFold DB B0Z545
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