Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q9TL04)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9TL04
- Type
- protein
- Length
- 1,463 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x54FBC17A5C73fF6f44d925D726c013269Fd7F733
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- Q9TL04
- Pockets
- 18 · best druggability 0.80
Structure
1 distinct chain · 24% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1463 | 24% helix, 12% strand | Q9TL04 |
Pockets
18 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 916 | 0.80 | 0.82 | 96 | empty |
| 2 | 893 | 0.75 | 0.79 | 95 | empty |
| 3 | 718 | 0.75 | 0.80 | 60 | empty |
| 4 | 438 | 0.69 | 0.80 | 46 | empty |
| 5 | 159 | 0.59 | 0.82 | 21 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9TL04
- Elsewhere: UniProt Q9TL04 · AlphaFold DB Q9TL04
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.