Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (A4QL96)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QL96
- Type
- protein
- Length
- 1,373 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- A4QL96
- Pockets
- 19 · best druggability 0.81
Structure
1 distinct chain · 24% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1373 | 24% helix, 20% strand | A4QL96 |
Pockets
19 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 664 | 0.81 | 0.86 | 82 | empty |
| 2 | 1097 | 0.77 | 0.79 | 88 | empty |
| 3 | 781 | 0.76 | 0.80 | 73 | empty |
| 4 | 852 | 0.69 | 0.75 | 60 | empty |
| 5 | 276 | 0.65 | 0.82 | 38 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QL96
- Elsewhere: UniProt A4QL96 · AlphaFold DB A4QL96
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