Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (A4QKS1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QKS1
- Type
- protein
- Length
- 1,379 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x98C29E4e93BFE5f5dbd72C20b6a45D527D088577
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- A4QKS1
- Pockets
- 20 · best druggability 0.80
Structure
1 distinct chain · 23% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1379 | 23% helix, 22% strand | A4QKS1 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1181 | 0.80 | 0.81 | 114 | empty |
| 2 | 986 | 0.78 | 0.80 | 86 | empty |
| 3 | 696 | 0.68 | 0.76 | 50 | empty |
| 4 | 618 | 0.68 | 0.76 | 63 | empty |
| 5 | 320 | 0.56 | 0.75 | 31 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QKS1
- Elsewhere: UniProt A4QKS1 · AlphaFold DB A4QKS1
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