Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (Q09MI8)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q09MI8
- Type
- protein
- Length
- 1,403 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA1f8bc17CB3611090dDAE0D139DbBDcb586eDf26
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- Q09MI8
- Pockets
- 15 · best druggability 0.84
Structure
1 distinct chain · 23% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1403 | 23% helix, 19% strand | Q09MI8 |
Pockets
15 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 858 | 0.84 | 0.86 | 100 | empty |
| 2 | 258 | 0.70 | 0.86 | 34 | empty |
| 3 | 687 | 0.64 | 0.73 | 60 | empty |
| 4 | 451 | 0.61 | 0.76 | 41 | empty |
| 5 | 202 | 0.58 | 0.80 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q09MI8
- Elsewhere: UniProt Q09MI8 · AlphaFold DB Q09MI8
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