Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (A6MMB2)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6MMB2
- Type
- protein
- Length
- 1,389 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc581CbC9cc939670cC5C03b5884a0d4fAe1DF8e7
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- A6MMB2
- Pockets
- 20 · best druggability 0.82
Structure
1 distinct chain · 24% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1389 | 24% helix, 21% strand | A6MMB2 |
Pockets
20 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 945 | 0.82 | 0.84 | 98 | empty |
| 2 | 540 | 0.65 | 0.76 | 46 | empty |
| 3 | 77 | 0.63 | 0.91 | 24 | empty |
| 4 | 155 | 0.61 | 0.84 | 24 | empty |
| 5 | 387 | 0.60 | 0.76 | 32 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6MMB2
- Elsewhere: UniProt A6MMB2 · AlphaFold DB A6MMB2
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