Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (A4QKI2)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QKI2
- Type
- protein
- Length
- 1,379 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA5c98ce6810a16B92Cbab4B878Cb05BeDef05E8E
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- A4QKI2
- Pockets
- 20 · best druggability 0.80
Structure
1 distinct chain · 23% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1379 | 23% helix, 22% strand | A4QKI2 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1082 | 0.80 | 0.81 | 98 | empty |
| 2 | 768 | 0.72 | 0.78 | 62 | empty |
| 3 | 779 | 0.67 | 0.74 | 50 | empty |
| 4 | 569 | 0.61 | 0.73 | 58 | empty |
| 5 | 213 | 0.55 | 0.78 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QKI2
- Elsewhere: UniProt A4QKI2 · AlphaFold DB A4QKI2
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