Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'' (A4QK08)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QK08
- Type
- protein
- Length
- 1,371 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB765e36a52DF056e3d74166883b608B9e6599Dd2
- Molecule
- DNA-directed RNA polymerase subunit beta''
- UniProt
- A4QK08
- Pockets
- 20 · best druggability 0.79
Structure
1 distinct chain · 24% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta'' | protein | 1371 | 24% helix, 22% strand | A4QK08 |
Pockets
20 pockets found on a 1 Å grid, 11 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1066 | 0.79 | 0.80 | 103 | empty |
| 2 | 786 | 0.74 | 0.79 | 62 | empty |
| 3 | 706 | 0.72 | 0.78 | 70 | empty |
| 4 | 254 | 0.68 | 0.84 | 26 | empty |
| 5 | 441 | 0.68 | 0.80 | 45 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QK08
- Elsewhere: UniProt A4QK08 · AlphaFold DB A4QK08
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