Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit gamma (P42079)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit gamma… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P42079
- Type
- protein
- Length
- 624 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
- Molecule
- DNA-directed RNA polymerase subunit gamma
- UniProt
- P42079
- Pockets
- 6 · best druggability 0.58
Structure
1 distinct chain · 40% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit gamma | protein | 624 | 40% helix, 18% strand | P42079 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 304 | 0.58 | 0.76 | 31 | empty |
| 2 | 160 | 0.46 | 0.76 | 20 | empty |
| 3 | 80 | 0.39 | 0.78 | 17 | empty |
| 4 | 118 | 0.39 | 0.74 | 19 | empty |
| 5 | 77 | 0.34 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42079
- Elsewhere: UniProt P42079 · AlphaFold DB P42079
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