Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A1XGM9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1XGM9
- Type
- protein
- Length
- 680 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A1XGM9
- Pockets
- 10 · best druggability 0.63
Structure
1 distinct chain · 39% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 680 | 39% helix, 15% strand | A1XGM9 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 387 | 0.63 | 0.77 | 39 | empty |
| 2 | 318 | 0.57 | 0.75 | 25 | empty |
| 3 | 153 | 0.57 | 0.82 | 25 | empty |
| 4 | 72 | 0.48 | 0.82 | 17 | empty |
| 5 | 160 | 0.46 | 0.76 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1XGM9
- Elsewhere: UniProt A1XGM9 · AlphaFold DB A1XGM9
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