Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q3BAQ1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3BAQ1
- Type
- protein
- Length
- 679 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC44446ee48911F8bE8310230f0ddcd95EccE6A09
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q3BAQ1
- Pockets
- 13 · best druggability 0.59
Structure
1 distinct chain · 41% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 679 | 41% helix, 15% strand | Q3BAQ1 |
Pockets
13 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 319 | 0.59 | 0.76 | 26 | empty |
| 2 | 122 | 0.58 | 0.84 | 22 | empty |
| 3 | 313 | 0.58 | 0.77 | 28 | empty |
| 4 | 251 | 0.53 | 0.76 | 27 | empty |
| 5 | 182 | 0.47 | 0.75 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3BAQ1
- Elsewhere: UniProt Q3BAQ1 · AlphaFold DB Q3BAQ1
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