Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (B1NWE1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1NWE1
- Type
- protein
- Length
- 680 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb642E6c52E5FE45567aC5188dA34E9680560713E
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- B1NWE1
- Pockets
- 11 · best druggability 0.62
Structure
1 distinct chain · 41% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 680 | 41% helix, 15% strand | B1NWE1 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 420 | 0.62 | 0.76 | 40 | empty |
| 2 | 131 | 0.60 | 0.84 | 20 | empty |
| 3 | 117 | 0.56 | 0.84 | 21 | empty |
| 4 | 274 | 0.56 | 0.77 | 36 | empty |
| 5 | 237 | 0.51 | 0.76 | 35 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1NWE1
- Elsewhere: UniProt B1NWE1 · AlphaFold DB B1NWE1
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