Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q9BBS8)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BBS8
- Type
- protein
- Length
- 682 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x815842391E89cADd7ff90b82BCE858dd25E196a6
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q9BBS8
- Pockets
- 9 · best druggability 0.67
Structure
1 distinct chain · 40% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 682 | 40% helix, 15% strand | Q9BBS8 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 483 | 0.67 | 0.78 | 45 | empty |
| 2 | 356 | 0.61 | 0.77 | 34 | empty |
| 3 | 393 | 0.60 | 0.75 | 34 | empty |
| 4 | 178 | 0.47 | 0.76 | 39 | empty |
| 5 | 162 | 0.41 | 0.73 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BBS8
- Elsewhere: UniProt Q9BBS8 · AlphaFold DB Q9BBS8
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