Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q56P12)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q56P12
- Type
- protein
- Length
- 689 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q56P12
- Pockets
- 10 · best druggability 0.68
Structure
1 distinct chain · 40% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 689 | 40% helix, 15% strand | Q56P12 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 462 | 0.68 | 0.79 | 58 | empty |
| 2 | 407 | 0.64 | 0.78 | 34 | empty |
| 3 | 306 | 0.58 | 0.76 | 28 | empty |
| 4 | 295 | 0.57 | 0.77 | 37 | empty |
| 5 | 92 | 0.44 | 0.79 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56P12
- Elsewhere: UniProt Q56P12 · AlphaFold DB Q56P12
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