Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q5SCX9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5SCX9
- Type
- protein
- Length
- 676 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q5SCX9
- Pockets
- 7 · best druggability 0.62
Structure
1 distinct chain · 40% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 676 | 40% helix, 17% strand | Q5SCX9 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 444 | 0.62 | 0.76 | 40 | empty |
| 2 | 342 | 0.58 | 0.76 | 33 | empty |
| 3 | 338 | 0.57 | 0.76 | 39 | empty |
| 4 | 78 | 0.37 | 0.77 | 14 | empty |
| 5 | 80 | 0.35 | 0.75 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SCX9
- Elsewhere: UniProt Q5SCX9 · AlphaFold DB Q5SCX9
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