Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A8SE82)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8SE82
- Type
- protein
- Length
- 680 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A8SE82
- Pockets
- 11 · best druggability 0.67
Structure
1 distinct chain · 41% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 680 | 41% helix, 15% strand | A8SE82 |
Pockets
11 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 403 | 0.67 | 0.79 | 46 | empty |
| 2 | 366 | 0.60 | 0.77 | 36 | empty |
| 3 | 363 | 0.60 | 0.76 | 41 | empty |
| 4 | 147 | 0.46 | 0.77 | 28 | empty |
| 5 | 51 | 0.40 | 0.81 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8SE82
- Elsewhere: UniProt A8SE82 · AlphaFold DB A8SE82
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