Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q7YJX9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7YJX9
- Type
- protein
- Length
- 678 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6c2cC0486fb44B18D7Df3279EE7D533F42858Eba
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q7YJX9
- Pockets
- 12 · best druggability 0.65
Structure
1 distinct chain · 41% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 678 | 41% helix, 16% strand | Q7YJX9 |
Pockets
12 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 237 | 0.65 | 0.83 | 27 | empty |
| 2 | 410 | 0.60 | 0.75 | 37 | empty |
| 3 | 393 | 0.60 | 0.76 | 41 | empty |
| 4 | 180 | 0.48 | 0.76 | 27 | empty |
| 5 | 93 | 0.46 | 0.80 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7YJX9
- Elsewhere: UniProt Q7YJX9 · AlphaFold DB Q7YJX9
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