Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q85CL6)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q85CL6
- Type
- protein
- Length
- 681 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x67Caacc81C91Ffe8C5b6E9623969278a00FCc789
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q85CL6
- Pockets
- 10 · best druggability 0.60
Structure
1 distinct chain · 40% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 681 | 40% helix, 17% strand | Q85CL6 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 365 | 0.60 | 0.76 | 37 | empty |
| 2 | 241 | 0.59 | 0.79 | 27 | empty |
| 3 | 191 | 0.51 | 0.77 | 30 | empty |
| 4 | 63 | 0.44 | 0.83 | 17 | empty |
| 5 | 119 | 0.43 | 0.77 | 22 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q85CL6
- Elsewhere: UniProt Q85CL6 · AlphaFold DB Q85CL6
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