Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A4QJJ0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QJJ0
- Type
- protein
- Length
- 680 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e5E98E011361C5888c92e2CDb7652E02Bd5C7Ed
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A4QJJ0
- Pockets
- 12 · best druggability 0.60
Structure
1 distinct chain · 42% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 680 | 42% helix, 16% strand | A4QJJ0 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 381 | 0.60 | 0.76 | 39 | empty |
| 2 | 221 | 0.59 | 0.80 | 31 | empty |
| 3 | 219 | 0.53 | 0.77 | 30 | empty |
| 4 | 258 | 0.53 | 0.76 | 35 | empty |
| 5 | 78 | 0.48 | 0.82 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QJJ0
- Elsewhere: UniProt A4QJJ0 · AlphaFold DB A4QJJ0
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