Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A4QJA6)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QJA6
- Type
- protein
- Length
- 680 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe6978154f003B8CE0AC2dEd3c6fdD559315c6935
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A4QJA6
- Pockets
- 11 · best druggability 0.61
Structure
1 distinct chain · 41% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 680 | 41% helix, 16% strand | A4QJA6 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 322 | 0.61 | 0.78 | 43 | empty |
| 2 | 372 | 0.60 | 0.76 | 38 | empty |
| 3 | 331 | 0.58 | 0.77 | 34 | empty |
| 4 | 80 | 0.54 | 0.85 | 17 | empty |
| 5 | 190 | 0.52 | 0.77 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QJA6
- Elsewhere: UniProt A4QJA6 · AlphaFold DB A4QJA6
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