Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q5QA71)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5QA71
- Type
- protein
- Length
- 682 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q5QA71
- Pockets
- 10 · best druggability 0.62
Structure
1 distinct chain · 41% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 682 | 41% helix, 15% strand | Q5QA71 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 346 | 0.62 | 0.78 | 34 | empty |
| 2 | 401 | 0.61 | 0.76 | 41 | empty |
| 3 | 306 | 0.58 | 0.77 | 33 | empty |
| 4 | 112 | 0.51 | 0.81 | 21 | empty |
| 5 | 245 | 0.50 | 0.74 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5QA71
- Elsewhere: UniProt Q5QA71 · AlphaFold DB Q5QA71
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