Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (C4LBV2)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C4LBV2
- Type
- protein
- Length
- 1,342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- C4LBV2
- Pockets
- 16 · best druggability 0.76
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1342 | 33% helix, 25% strand | C4LBV2 |
Pockets
16 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1178 | 0.76 | 0.78 | 91 | empty |
| 2 | 700 | 0.72 | 0.79 | 63 | empty |
| 3 | 350 | 0.61 | 0.78 | 38 | empty |
| 4 | 268 | 0.58 | 0.78 | 42 | empty |
| 5 | 343 | 0.57 | 0.76 | 53 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C4LBV2
- Elsewhere: UniProt C4LBV2 · AlphaFold DB C4LBV2
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