Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q5M2F5)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5M2F5
- Type
- protein
- Length
- 1,193 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x407F95e705Dc2c05f8619606Ca4E9f2a932659E6
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q5M2F5
- Pockets
- 20 · best druggability 0.70
Structure
1 distinct chain · 29% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1193 | 29% helix, 27% strand | Q5M2F5 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 355 | 0.70 | 0.83 | 34 | empty |
| 2 | 54 | 0.66 | 0.96 | 20 | empty |
| 3 | 467 | 0.64 | 0.77 | 37 | empty |
| 4 | 234 | 0.59 | 0.80 | 27 | empty |
| 5 | 350 | 0.59 | 0.76 | 32 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5M2F5
- Elsewhere: UniProt Q5M2F5 · AlphaFold DB Q5M2F5
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