Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q5LXV3)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5LXV3
- Type
- protein
- Length
- 1,193 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8DA6C6750089f15EC3259e560D5B158356F5Ab08
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q5LXV3
- Pockets
- 20 · best druggability 0.72
Structure
1 distinct chain · 29% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1193 | 29% helix, 27% strand | Q5LXV3 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 411 | 0.72 | 0.83 | 45 | empty |
| 2 | 61 | 0.68 | 0.96 | 19 | empty |
| 3 | 486 | 0.66 | 0.78 | 37 | empty |
| 4 | 330 | 0.60 | 0.78 | 29 | empty |
| 5 | 203 | 0.58 | 0.81 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5LXV3
- Elsewhere: UniProt Q5LXV3 · AlphaFold DB Q5LXV3
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