Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A3CKD3)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A3CKD3
- Type
- protein
- Length
- 1,188 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9364A6372a080Fb5eCc644208c8e48C927a22807
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A3CKD3
- Pockets
- 18 · best druggability 0.68
Structure
1 distinct chain · 28% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1188 | 28% helix, 27% strand | A3CKD3 |
Pockets
18 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.68 | 0.96 | 20 | empty |
| 2 | 351 | 0.68 | 0.82 | 35 | empty |
| 3 | 429 | 0.66 | 0.79 | 36 | empty |
| 4 | 369 | 0.59 | 0.76 | 32 | empty |
| 5 | 244 | 0.59 | 0.80 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3CKD3
- Elsewhere: UniProt A3CKD3 · AlphaFold DB A3CKD3
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