Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A4VYU3)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4VYU3
- Type
- protein
- Length
- 1,190 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2CfD32b173ecf9861B5DB5dFF2452f89E7bCADff
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A4VYU3
- Pockets
- 20 · best druggability 0.70
Structure
1 distinct chain · 29% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1190 | 29% helix, 28% strand | A4VYU3 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 357 | 0.70 | 0.83 | 36 | empty |
| 2 | 627 | 0.68 | 0.77 | 54 | empty |
| 3 | 58 | 0.68 | 0.97 | 20 | empty |
| 4 | 472 | 0.65 | 0.77 | 36 | empty |
| 5 | 153 | 0.54 | 0.80 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4VYU3
- Elsewhere: UniProt A4VYU3 · AlphaFold DB A4VYU3
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