Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A8YZP0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8YZP0
- Type
- protein
- Length
- 1,183 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xccC4FB4F7e27ce58a8B5D4D5a0B27999b032ba3c
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A8YZP0
- Pockets
- 15 · best druggability 0.72
Structure
1 distinct chain · 27% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1183 | 27% helix, 29% strand | A8YZP0 |
Pockets
15 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 689 | 0.72 | 0.79 | 61 | empty |
| 2 | 59 | 0.68 | 0.96 | 20 | empty |
| 3 | 452 | 0.67 | 0.79 | 35 | empty |
| 4 | 432 | 0.66 | 0.79 | 50 | empty |
| 5 | 418 | 0.59 | 0.75 | 54 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8YZP0
- Elsewhere: UniProt A8YZP0 · AlphaFold DB A8YZP0
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