Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (B1KMZ0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1KMZ0
- Type
- protein
- Length
- 1,343 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0802a4d42FE33Ea91364Adff0d1651923952Ab99
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- B1KMZ0
- Pockets
- 20 · best druggability 0.78
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1343 | 33% helix, 25% strand | B1KMZ0 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 984 | 0.78 | 0.80 | 80 | empty |
| 2 | 562 | 0.71 | 0.80 | 63 | empty |
| 3 | 491 | 0.71 | 0.81 | 47 | empty |
| 4 | 53 | 0.66 | 0.96 | 17 | empty |
| 5 | 336 | 0.57 | 0.76 | 46 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1KMZ0
- Elsewhere: UniProt B1KMZ0 · AlphaFold DB B1KMZ0
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