Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A8F0P7)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8F0P7
- Type
- protein
- Length
- 1,373 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x570223B6645226588372Fd044195007001f1EB3A
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A8F0P7
- Pockets
- 17 · best druggability 0.81
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1373 | 33% helix, 25% strand | A8F0P7 |
Pockets
17 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1171 | 0.81 | 0.82 | 85 | empty |
| 2 | 990 | 0.75 | 0.78 | 99 | empty |
| 3 | 360 | 0.68 | 0.81 | 30 | empty |
| 4 | 52 | 0.64 | 0.95 | 16 | empty |
| 5 | 381 | 0.63 | 0.78 | 43 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8F0P7
- Elsewhere: UniProt A8F0P7 · AlphaFold DB A8F0P7
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