Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A1R8V4)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1R8V4
- Type
- protein
- Length
- 1,173 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7a1388B6Aad67B04634A32f63b8A6D6005eab86c
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A1R8V4
- Pockets
- 20 · best druggability 0.77
Structure
1 distinct chain · 28% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1173 | 28% helix, 26% strand | A1R8V4 |
Pockets
20 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 907 | 0.77 | 0.80 | 77 | empty |
| 2 | 456 | 0.76 | 0.85 | 53 | empty |
| 3 | 739 | 0.70 | 0.77 | 52 | empty |
| 4 | 62 | 0.70 | 0.97 | 22 | empty |
| 5 | 410 | 0.68 | 0.81 | 38 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1R8V4
- Elsewhere: UniProt A1R8V4 · AlphaFold DB A1R8V4
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