Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q3SSY0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3SSY0
- Type
- protein
- Length
- 1,380 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q3SSY0
- Pockets
- 16 · best druggability 0.81
Structure
1 distinct chain · 33% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1380 | 33% helix, 24% strand | Q3SSY0 |
Pockets
16 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1040 | 0.81 | 0.82 | 84 | empty |
| 2 | 1040 | 0.75 | 0.78 | 112 | empty |
| 3 | 381 | 0.68 | 0.81 | 35 | empty |
| 4 | 148 | 0.61 | 0.84 | 26 | empty |
| 5 | 192 | 0.58 | 0.81 | 38 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3SSY0
- Elsewhere: UniProt Q3SSY0 · AlphaFold DB Q3SSY0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.