Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q1XDN5)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1XDN5
- Type
- protein
- Length
- 1,143 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6F585F29dcdf6664f9a1f5624ac1eF1F94ffd645
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q1XDN5
- Pockets
- 15 · best druggability 0.70
Structure
1 distinct chain · 30% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1143 | 30% helix, 25% strand | Q1XDN5 |
Pockets
15 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 594 | 0.70 | 0.79 | 48 | empty |
| 2 | 575 | 0.68 | 0.77 | 55 | empty |
| 3 | 337 | 0.67 | 0.82 | 45 | empty |
| 4 | 79 | 0.63 | 0.90 | 21 | empty |
| 5 | 192 | 0.53 | 0.78 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1XDN5
- Elsewhere: UniProt Q1XDN5 · AlphaFold DB Q1XDN5
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