Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q5FM97)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5FM97
- Type
- protein
- Length
- 1,213 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35CE9E273dC599B97173f7Fa74880CacB153321E
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q5FM97
- Pockets
- 20 · best druggability 0.67
Structure
1 distinct chain · 28% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1213 | 28% helix, 26% strand | Q5FM97 |
Pockets
20 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 457 | 0.67 | 0.79 | 59 | empty |
| 2 | 349 | 0.62 | 0.78 | 36 | empty |
| 3 | 353 | 0.61 | 0.78 | 36 | empty |
| 4 | 195 | 0.54 | 0.79 | 24 | empty |
| 5 | 146 | 0.52 | 0.80 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5FM97
- Elsewhere: UniProt Q5FM97 · AlphaFold DB Q5FM97
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