Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A6TGP0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6TGP0
- Type
- protein
- Length
- 1,342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF9823eDe050Afbb04470bAd07dDf625b0dBb314f
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A6TGP0
- Pockets
- 17 · best druggability 0.79
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1342 | 33% helix, 25% strand | A6TGP0 |
Pockets
17 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 930 | 0.79 | 0.81 | 85 | empty |
| 2 | 390 | 0.66 | 0.80 | 44 | empty |
| 3 | 434 | 0.66 | 0.79 | 35 | empty |
| 4 | 52 | 0.66 | 0.96 | 18 | empty |
| 5 | 334 | 0.60 | 0.78 | 41 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6TGP0
- Elsewhere: UniProt A6TGP0 · AlphaFold DB A6TGP0
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