Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q06RD9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q06RD9
- Type
- protein
- Length
- 1,064 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x362a6d063b1B7E1B6EfD3A9A7CA3612e3FE037AA
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q06RD9
- Pockets
- 17 · best druggability 0.75
Structure
1 distinct chain · 31% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1064 | 31% helix, 27% strand | Q06RD9 |
Pockets
17 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 704 | 0.75 | 0.80 | 71 | empty |
| 2 | 523 | 0.69 | 0.79 | 55 | empty |
| 3 | 57 | 0.66 | 0.95 | 19 | empty |
| 4 | 305 | 0.63 | 0.80 | 30 | empty |
| 5 | 225 | 0.54 | 0.77 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06RD9
- Elsewhere: UniProt Q06RD9 · AlphaFold DB Q06RD9
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