Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A6MMT6)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6MMT6
- Type
- protein
- Length
- 1,070 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf7FB783782B285Db3199EbD0D87C7bB413D7D508
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A6MMT6
- Pockets
- 16 · best druggability 0.79
Structure
1 distinct chain · 30% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1070 | 30% helix, 27% strand | A6MMT6 |
Pockets
16 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1040 | 0.79 | 0.80 | 101 | empty |
| 2 | 1041 | 0.73 | 0.77 | 90 | empty |
| 3 | 54 | 0.72 | 0.98 | 17 | empty |
| 4 | 93 | 0.53 | 0.84 | 18 | empty |
| 5 | 103 | 0.53 | 0.83 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6MMT6
- Elsewhere: UniProt A6MMT6 · AlphaFold DB A6MMT6
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