Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (C4K4F1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C4K4F1
- Type
- protein
- Length
- 1,341 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9d7467021Db73aeAa95A2Ab5150B26f506bE6044
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- C4K4F1
- Pockets
- 13 · best druggability 0.79
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1341 | 33% helix, 25% strand | C4K4F1 |
Pockets
13 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 955 | 0.79 | 0.81 | 82 | empty |
| 2 | 551 | 0.72 | 0.80 | 51 | empty |
| 3 | 501 | 0.68 | 0.79 | 58 | empty |
| 4 | 425 | 0.64 | 0.78 | 58 | empty |
| 5 | 428 | 0.62 | 0.77 | 57 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C4K4F1
- Elsewhere: UniProt C4K4F1 · AlphaFold DB C4K4F1
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