Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A5UH20)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5UH20
- Type
- protein
- Length
- 1,343 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A5UH20
- Pockets
- 13 · best druggability 0.80
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1343 | 33% helix, 25% strand | A5UH20 |
Pockets
13 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 928 | 0.80 | 0.82 | 77 | empty |
| 2 | 906 | 0.74 | 0.78 | 99 | empty |
| 3 | 538 | 0.72 | 0.81 | 60 | empty |
| 4 | 402 | 0.61 | 0.76 | 55 | empty |
| 5 | 165 | 0.54 | 0.80 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5UH20
- Elsewhere: UniProt A5UH20 · AlphaFold DB A5UH20
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