Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A4IJI1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4IJI1
- Type
- protein
- Length
- 1,190 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xab9043322A71a81ea610290ba422DBfFACaFffDf
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A4IJI1
- Pockets
- 20 · best druggability 0.72
Structure
1 distinct chain · 27% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1190 | 27% helix, 28% strand | A4IJI1 |
Pockets
20 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 679 | 0.72 | 0.79 | 55 | empty |
| 2 | 60 | 0.68 | 0.96 | 18 | empty |
| 3 | 227 | 0.64 | 0.83 | 34 | empty |
| 4 | 340 | 0.62 | 0.79 | 26 | empty |
| 5 | 211 | 0.58 | 0.80 | 32 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4IJI1
- Elsewhere: UniProt A4IJI1 · AlphaFold DB A4IJI1
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