Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A8LM40)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8LM40
- Type
- protein
- Length
- 1,378 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x20691be19842188099108aB87e48b57BA599A09F
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A8LM40
- Pockets
- 16 · best druggability 0.81
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1378 | 33% helix, 25% strand | A8LM40 |
Pockets
16 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1121 | 0.81 | 0.82 | 96 | empty |
| 2 | 851 | 0.79 | 0.82 | 61 | empty |
| 3 | 694 | 0.73 | 0.80 | 79 | empty |
| 4 | 52 | 0.65 | 0.96 | 16 | empty |
| 5 | 325 | 0.65 | 0.80 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8LM40
- Elsewhere: UniProt A8LM40 · AlphaFold DB A8LM40
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