Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A4J103)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4J103
- Type
- protein
- Length
- 1,145 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A4J103
- Pockets
- 20 · best druggability 0.67
Structure
1 distinct chain · 27% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1145 | 27% helix, 28% strand | A4J103 |
Pockets
20 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.67 | 0.96 | 15 | empty |
| 2 | 477 | 0.67 | 0.79 | 52 | empty |
| 3 | 253 | 0.62 | 0.81 | 32 | empty |
| 4 | 241 | 0.53 | 0.77 | 36 | empty |
| 5 | 150 | 0.53 | 0.80 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4J103
- Elsewhere: UniProt A4J103 · AlphaFold DB A4J103
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