Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q6AP78)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6AP78
- Type
- protein
- Length
- 1,360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x981874BE48BB9B402a2B2B7e233BD910bFf1b4D8
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q6AP78
- Pockets
- 17 · best druggability 0.79
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1360 | 33% helix, 25% strand | Q6AP78 |
Pockets
17 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1190 | 0.79 | 0.81 | 87 | empty |
| 2 | 904 | 0.75 | 0.78 | 100 | empty |
| 3 | 276 | 0.67 | 0.83 | 35 | empty |
| 4 | 547 | 0.65 | 0.76 | 54 | empty |
| 5 | 50 | 0.64 | 0.95 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6AP78
- Elsewhere: UniProt Q6AP78 · AlphaFold DB Q6AP78
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