Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A4QKS3)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QKS3
- Type
- protein
- Length
- 1,072 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1D58c05FDe6847ACA12d0a86ffEe593119157D18
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A4QKS3
- Pockets
- 15 · best druggability 0.73
Structure
1 distinct chain · 30% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1072 | 30% helix, 26% strand | A4QKS3 |
Pockets
15 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 702 | 0.73 | 0.79 | 70 | empty |
| 2 | 489 | 0.67 | 0.78 | 51 | empty |
| 3 | 55 | 0.66 | 0.95 | 20 | empty |
| 4 | 357 | 0.58 | 0.76 | 31 | empty |
| 5 | 264 | 0.57 | 0.78 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QKS3
- Elsewhere: UniProt A4QKS3 · AlphaFold DB A4QKS3
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