Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q890N4)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q890N4
- Type
- protein
- Length
- 1,236 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- Q890N4
- Pockets
- 16 · best druggability 0.75
Structure
1 distinct chain · 28% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1236 | 28% helix, 26% strand | Q890N4 |
Pockets
16 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 810 | 0.75 | 0.79 | 76 | empty |
| 2 | 515 | 0.71 | 0.81 | 50 | empty |
| 3 | 312 | 0.60 | 0.78 | 49 | empty |
| 4 | 241 | 0.53 | 0.77 | 34 | empty |
| 5 | 298 | 0.52 | 0.74 | 38 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q890N4
- Elsewhere: UniProt Q890N4 · AlphaFold DB Q890N4
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