Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (A5I7L4)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5I7L4
- Type
- protein
- Length
- 1,232 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x04371A27B3b7eB60047Af9d5D774d8e9e3353C98
- Molecule
- DNA-directed RNA polymerase subunit beta
- UniProt
- A5I7L4
- Pockets
- 18 · best druggability 0.72
Structure
1 distinct chain · 28% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta | protein | 1232 | 28% helix, 26% strand | A5I7L4 |
Pockets
18 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 573 | 0.72 | 0.80 | 54 | empty |
| 2 | 550 | 0.71 | 0.80 | 57 | empty |
| 3 | 50 | 0.67 | 0.97 | 16 | empty |
| 4 | 338 | 0.59 | 0.77 | 47 | empty |
| 5 | 229 | 0.54 | 0.77 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5I7L4
- Elsewhere: UniProt A5I7L4 · AlphaFold DB A5I7L4
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